2019-06-19 14:36:13 : Started OrthoFinder version 2.3.3 Command Line: orthofinder -f /import/data/mealybug_compara_40_93/exported/canonical_proteins -S diamond WorkingDirectory_Base: /import/data/mealybug_compara_40_93/exported/canonical_proteins/OrthoFinder/Results_Jun19/WorkingDirectory/ Species used: 0: ACYPIS_-_canonical_proteins.fa 1: BEMTAB_-_canonical_proteins.fa 2: MYZPER_-_canonical_proteins.fa 3: PLACIT_-_canonical_proteins.fa 4: PLAFIC_-_canonical_proteins.fa 5: PSELON_-_canonical_proteins.fa 6: RHOPRO_-_canonical_proteins.fa FN_Orthogroups: /import/data/mealybug_compara_40_93/exported/canonical_proteins/OrthoFinder/Results_Jun19/WorkingDirectory/clusters_OrthoFinder_I1.5.txt_id_pairs.txt WorkingDirectory_Trees: /import/data/mealybug_compara_40_93/exported/canonical_proteins/OrthoFinder/Results_Jun19/WorkingDirectory/ 2019-06-19 16:25:47 : OrthoFinder run completed