WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      233       93.95      -   281     1.21     16.31

   Group 1       63       95.45      -    72     1.14     12.70
   Group 2       52       92.86      -    62     1.19     15.38
   Group 3       54       88.52      -    62     1.15     12.96
   Group 4       64       98.46      -    85     1.33     23.44

   Partial      243       97.98      -   321     1.32     23.05

   Group 1       64       96.97      -    77     1.20     15.62
   Group 2       54       96.43      -    70     1.30     20.37
   Group 3       60       98.36      -    78     1.30     23.33
   Group 4       65      100.00      -    96     1.48     32.31

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0025
KOG0948
KOG1123
KOG1159
KOG1355
KOG1458
KOG1636
KOG2004
KOG2303
KOG2415
KOG2653
KOG3157
KOG3189
KOG3318
KOG3400

# Category: Partial 
KOG1159
KOG2303
KOG3157
KOG3318
KOG3400