WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      239       96.37      -   294     1.23     16.74

   Group 1       64       96.97      -    73     1.14     10.94
   Group 2       53       94.64      -    63     1.19     11.32
   Group 3       59       96.72      -    75     1.27     20.34
   Group 4       63       96.92      -    83     1.32     23.81

   Partial      243       97.98      -   319     1.31     21.81

   Group 1       64       96.97      -    78     1.22     17.19
   Group 2       54       96.43      -    68     1.26     14.81
   Group 3       61      100.00      -    85     1.39     26.23
   Group 4       64       98.46      -    88     1.38     28.12

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0291
KOG0948
KOG1123
KOG1145
KOG1355
KOG1795
KOG2004
KOG2472
KOG3400

# Category: Partial 
KOG0291
KOG1123
KOG1145
KOG2472
KOG3400